Bioconductor Alternative Splicing

Showing : Alternative Splicing • reset

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2.7k

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sgseq splicing alternative splicing

updated 8.2 years ago by Leonard Goldstein ▴ 220 • written 8.2 years ago by vakul.mohanty ▴ 20

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2.2k

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DEXSeq DESeq2 dexseq deseq2 alternative splicing

8.6 years ago Fahmi Nazarie • 0

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1.9k

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dexseq alternative splicing exon skipping

updated 9.2 years ago by Simon Anders ★ 3.7k • written 9.2 years ago by ebadr • 0

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1.5k

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rna-seq alternative splicing SGSeq

5.6 years ago • updated 5.5 years ago andrea.bast • 0

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1.3k

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limma rna-seq alternative splicing

updated 6.6 years ago by Gordon Smyth 50k • written 6.6 years ago by lirongrossmann ▴ 80

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maser R rMATs alternative splicing

5.7 years ago Reza • 0

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1.2k

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limma voom alternative splicing

8.2 years ago osa.zuta ▴ 40

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1.1k

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deseq2 dexseq alternative splicing

updated 8.5 years ago by Michael Love 42k • written 8.5 years ago by sahiilseth • 0

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1.1k

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aspli readCounts rna-seq alternative splicing AS

5.3 years ago fernandalpcosta ▴ 10

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966

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rnaseq alternative splicing ASpli

5.5 years ago nicolas.guyon2 • 0

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904

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R alternative splicing ASpli AsDiscover

5.4 years ago abdul rawoof ▴ 60

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901

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sgseq alternative splicing rna seq

updated 4.5 years ago by Leonard Goldstein ▴ 220 • written 4.5 years ago by 116100016 • 0

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791

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rna seq SGSeq Alternative splicing

updated 4.6 years ago by Leonard Goldstein ▴ 220 • written 4.6 years ago by 116100016 • 0

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699

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psichomics SUPPA Splicing Alternative Splicing Retained Introns

3.6 years ago noahhelton98 ▴ 20

14 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Thank you so much!

Answer: recount3 problem downloading data from source sra by Leonardo Collado Torres ★ 1.0k

Hi, I wasn't able to reproduce the issue on both bioc 3.19 (current release version) and 3.18 (closer to your session info). My guess is…

Answer: Running ENmix with mouse methylation manifest: readidat error - Error in readman by minardsmitha ▴ 10

Well it turns out there is a typo in the manifest file name. This particular issue is resolved by correcting the typo. A new error now …

Answer: Documenting resources in an `ExperimentHub` package? by James W. MacDonald 66k

The easiest way to do that IMO is to use emacs/ESS (or I believe there is some newfangled thing called RStudio? Not personally familiar, bu…

Comment: ChAMP installation issue by shepherl 3.9k

We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…

Votes

Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data

Comment: Ensembl plants at annotationHub?

how to control age and gender effect in expression data using DESeq2

Answer: Error retrieving ensembl gene id using biomaRt...

Comment: LRT, more than two conditions and pairwise comparisons

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Scholar to Mike Smith ★ 6.5k

Popular Question to mohammedtoufiq91 ▴ 10